miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Ciona intestinalis



ABOUT THIS RECORD

ID: MNEST005575
species: Ciona intestinalis
miRNA family: miR-4179
source: miRNEST

Taxonomy by NCBI:
Ciona intestinalis Ciona Cionidae Phlebobranchia Enterogona Ascidiacea Tunicata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CGCCTCATCTGGTATAAACTT

miRNA*
GGTTTTATACCAGATGAGTCGAA

mismatches: 1
bulges: 2

View larger
pre-miRNA
TTACAACGCATTATAAAATCTAATAGTTTTTCGCCTCATCTGGTATAAACTTTAATTTACACTTATTTCAGTGATATCACATGTTTAGTGTTGTTGTGTC
AAACCTTGATGAAACCTTGCCGAATAGCAGACACAACATTGGAATAAAATTAATGGTTTTATACCAGATGAGTCGAAAAAGGTTATTTTATATTTTGCCT
GTTAG


dot-bracket secondary structure
..(((..(((.(((((((..((((..(((((((.((((((((((((((((((((((((.....((((((((((...((...(((((.(((..(((.((((
((...)))))).)))..))).)))))...)).....))))))))))))))))).)).))))))))))))))).))))))).)))))))))))...))).)
))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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